PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8296705.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 118aa MW: 13311.2 Da PI: 9.6358 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46 | 1.2e-14 | 37 | 84 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++v + G g+W+++ g++R++k+c++rw ++l Rmu_co8296705.1_g000001.1 37 KGPWTAVEDRILMEYVSKQGEGNWNSVQWNSGLKRCGKSCRLRWANHL 84 79******************************************9996 PP | |||||||
2 | Myb_DNA-binding | 26.4 | 1.6e-08 | 90 | 117 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g++T+eE+ l++++++++G++ W++ a+ Rmu_co8296705.1_g000001.1 90 KGAFTPEEERLILELHAKYGNK-WARMAS 117 799*******************.**9885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MAHNGINDIN GTAMYGEGNP SELSCVFMGG NNMGLRKGPW TAVEDRILME YVSKQGEGNW 60 NSVQWNSGLK RCGKSCRLRW ANHLRPNLKK GAFTPEEERL ILELHAKYGN KWARMASQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G32460.2 | 3e-47 | MYB family protein |