PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8276131.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 166aa MW: 17962.5 Da PI: 8.5165 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 120 | 2.9e-37 | 53 | 131 | 2 | 74 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa...sec...e 74 +k+++++++hTkv+gR+RRvR++a caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a s c + Rmu_co8276131.1_g000001.1 53 VVKRSSTKDRHTKVEGRGRRVRMPAACAARVFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAiavSVCgtlK 131 5799************************************************************888884444444321 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MEPNQRQSLE ETDGITNPSV SGQQFPAVAK KEEFEDGSLS MGLIPVPAPA KPVVKRSSTK 60 DRHTKVEGRG RRVRMPAACA ARVFQLTREL GHKSDGETIR WLLEHAEPAI IAATGTGTVP 120 AIAVSVCGTL KIPTSSLANP NGEVSELPRK KRKLHCNSDF VDVEEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 148 | 154 | PRKKRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 5e-54 | TCP family protein |