PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8051662.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bZIP | ||||||||
Protein Properties | Length: 130aa MW: 15674.9 Da PI: 11.9273 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38 | 3.5e-12 | 27 | 71 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 ++ rr+++NRe+ArrsR RK++ ie+L++ v L eN++L ++l Rmu_co8051662.1_g000001.1 27 RKRRRMISNRESARRSRMRKQKHIENLRTQVNRLRIENRELNNRL 71 5789**********************************9998765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
RSGPDHAKSC PINGSKRTVS VSPVDERKRR RMISNRESAR RSRMRKQKHI ENLRTQVNRL 60 RIENRELNNR LRFVIYHFQR VHTDNDMLRA EHTMLQQKLS DIRQILVFRQ LQHMSSVWPC 120 DTVITEQTHH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 27 | 31 | RKRRR |
2 | 27 | 48 | RKRRRMISNRESARRSRMRKQK |
3 | 40 | 47 | RRSRMRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 5e-21 | bZIP family protein |