PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8001466.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 77aa MW: 8748.92 Da PI: 9.859 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37.7 | 4.6e-12 | 4 | 48 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W +eE+ ++ + ++lG+g+W+ Iar k+Rt+ q+ s+ + y Rmu_co8001466.1_g000001.1 4 PWAEEEHRMFLIGLEKLGKGDWRGIARNYVKTRTPTQVASHAHRY 48 7****************************************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 77 aa Download sequence |
RVIPWAEEEH RMFLIGLEKL GKGDWRGIAR NYVKTRTPTQ VASHAHRYFT RQSTSSSSDP 60 PHMPEEQALL LGSSMVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 5e-28 | MYB_related family protein |