PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0177751 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 232aa MW: 25691.7 Da PI: 8.495 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 92.2 | 4.7e-29 | 35 | 86 | 4 | 57 |
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 +Y+eCl+NhAaslG++a+DGCgEf+ + +++++ +l+CaACgCHRnFHRr + RcHm_v2.0_Chr7g0177751 35 DVYRECLRNHAASLGSYATDGCGEFTLD--DTSSPGGLQCAACGCHRNFHRRVT 86 58*************************8..5578******************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MRLCFCTLVY HQAHSYLRLR EPEKREMEGE NSSNDVYREC LRNHAASLGS YATDGCGEFT 60 LDDTSSPGGL QCAACGCHRN FHRRVTYAPG VGRSSGGGTA HHRVISCSSR GDLHHEMMTS 120 QELIDYNVGG GGGAAARQMM VVESPDSGDR SGSGRKRFRS KFTVEQKEKM LAFAEKLGWK 180 LQRKDLEDEI ERFCRSIGVS RQVFKVWMHN HKNLSSSSSA STTANASSLT TQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-33 | ZF-HD family protein |