PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr6g0259251 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 241aa MW: 28430.8 Da PI: 9.7542 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 55.3 | 1.2e-17 | 26 | 98 | 17 | 91 |
E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 ++p +f+e+ ++++e tlt + + rsW+vk+ +++++ +++++GW++F ++n +kegDf+vF+++g++ f+ RcHm_v2.0_Chr6g0259251 26 RIPPHFLEHGRNDQPERATLTWNMSLERSWTVKV--CRTKECVYFKDGWRNFLNDNSVKEGDFLVFTYEGEMHFS 98 69*****65566667778999999999*******..999999*************************99876663 PP | |||||||
2 | B3 | 41.9 | 1.8e-13 | 157 | 241 | 11 | 99 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 k + ++p f +++ + ++ ++ + sg + ++vkl + ++ +++kGW+ F+++n++ +gD++ F+l + e ++vv+ RcHm_v2.0_Chr6g0259251 157 KKYCVYSIPTAFYRKYLSA--RNYEVAFLKISGgtKWYKVKL--VPSLQTAFMSKGWSVFAHDNQIVVGDVCAFELLK--ENKMVVH 237 5668889*********543..667899999777655568999..*******************************876..66679*9 PP EE-S CS B3 96 vfrk 99 ++rk RcHm_v2.0_Chr6g0259251 238 ILRK 241 9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MCTYKLSMNY IILKLQFLFL YVFLKRIPPH FLEHGRNDQP ERATLTWNMS LERSWTVKVC 60 RTKECVYFKD GWRNFLNDNS VKEGDFLVFT YEGEMHFSIH DYENNCCKRG DFPTNNEPHE 120 ESAPAKSTKR NPGSPKKDYS AESFRSKFPH YTRSIKKKYC VYSIPTAFYR KYLSARNYEV 180 AFLKISGGTK WYKVKLVPSL QTAFMSKGWS VFAHDNQIVV GDVCAFELLK ENKMVVHILR 240 K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31640.1 | 1e-15 | B3 family protein |