PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr5g0028631 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 168aa MW: 18983.5 Da PI: 10.0115 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.9 | 2e-14 | 4 | 66 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 rr+++t+t++q+++L+elF++ r p+ e+ +++ +l +++ ++V++WF N+Ra+ek+ RcHm_v2.0_Chr5g0028631 4 RRSKWTPTTDQIRILKELFYNkgVRSPTVEQVQRIYLQLkwysKIEFKNVYFWFVNQRAREKQ 66 899*****************7789*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 81.6 | 9.7e-27 | 5 | 68 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r++WtPt++Qi+iL+el++ +G+r+P+ e++qri +L+ y kie kNV++WF N++aRe+qk+ RcHm_v2.0_Chr5g0028631 5 RSKWTPTTDQIRILKELFYnKGVRSPTVEQVQRIYLQLKWYSKIEFKNVYFWFVNQRAREKQKK 68 789*************98769*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MLCRRSKWTP TTDQIRILKE LFYNKGVRSP TVEQVQRIYL QLKWYSKIEF KNVYFWFVNQ 60 RAREKQKKTS TSDVHVPMQR SGLVGGSINL NFGSTSSADV GGSIMEQRGE DHQEVKTLPL 120 FPIHSEDIFG NMKTTSDGGG GHGGGSYISL ELSLSCEGKA GNKNFWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 9e-25 | WOX family protein |