PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr4g0438661 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 322aa MW: 35165.6 Da PI: 7.0004 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.9 | 7.5e-32 | 146 | 203 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+ RcHm_v2.0_Chr4g0438661 146 EDGYRWRKYGQKAVKNSPYPRSYYRCTNSKCTVKKRVERSSEDPTTVITTYEGQHCHH 203 8******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MDGDKDTRDP GLTEFPTEPS WDSPYFFSND RDTTVLSEFG WNFSPDHQIG ADDRSDLAGS 60 STTTTLAEQL PERSSNTNSD PAPVVGSVSS SSTEDPPERS TGSGSGGTPP PETPSSTTKV 120 NKKKGQKRIR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTNSKCTVKK 180 RVERSSEDPT TVITTYEGQH CHHTVAFPRG GGGVNIISHD QSGFAAGSQL MQLPPVSQFM 240 HYPTSIQPRS QISPTHNLTV GGSQSHRLVR AGGTHYHHDQ AAGGSQCIIN PNHEPLRVVP 300 VPTDEGLLGD IVPPGMRNPF DG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 8e-61 | WRKY family protein |