PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0472661

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 532aa MW: 57977.9 Da PI: 7.4071

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0472661	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.5	1e-06	172	234	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a +e L++k++ L eN++Lk + + k++++l+ + RcHm_v2.0_Chr3g0472661 172 EKEERRIRRILANRESARQTIRRRQALCEDLTKKAADLALENESLKRKKDLALKQYQSLEETN 234 78999****************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MVCSETTTPS FASSSSEAGA AEASSSSSSG GGGGEADPMM VKEELEAAEA LADLAHLAMR 60 ENSGAESAGN WGLKGKRAKK RVKSESPPTL SGSNPVPACP DLPQDQAVIG PAQCERVCTN 120 VVGEPVKTEL VMNKKIAKFE HDAELTTSTP ICTTSYPSFS CTKSRRNLTE EEKEERRIRR 180 ILANRESARQ TIRRRQALCE DLTKKAADLA LENESLKRKK DLALKQYQSL EETNRLLKVQ 240 MAKARKAEVE ETPDENMSAY VQIPSSSPTN PPLFLFNRPP FTPVFWPSII QSSNSIQLQQ 300 VPQNPMATPS NISLPCNGTA DSSHELGNPI NVNGSRTPLY VFPCPWFFPH FDNGNGLQPQ 360 SSCLENKKEG AFFNNQCSAS SSSRTAAQLD NNQSTFPVRL DTEASGSMEA GPRTDLNENP 420 AQFPLDGGDQ HTGFHPKENG SREIFLSPLL NHGGVASTIK HENGLESDFS ANTEKSSTAC 480 HPFSSLPEKN SEPIIYPSRK IADAIAAAEA RKRRKKLTKL KNLHGRQCRM QC

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MVCSETTTPS FASSSSEAGA AEASSSSSSG GGGGEADPMM VKEELEAAEA LADLAHLAMR  60
ENSGAESAGN WGLKGKRAKK RVKSESPPTL SGSNPVPACP DLPQDQAVIG PAQCERVCTN  120
VVGEPVKTEL VMNKKIAKFE HDAELTTSTP ICTTSYPSFS CTKSRRNLTE EEKEERRIRR  180
ILANRESARQ TIRRRQALCE DLTKKAADLA LENESLKRKK DLALKQYQSL EETNRLLKVQ  240
MAKARKAEVE ETPDENMSAY VQIPSSSPTN PPLFLFNRPP FTPVFWPSII QSSNSIQLQQ  300
VPQNPMATPS NISLPCNGTA DSSHELGNPI NVNGSRTPLY VFPCPWFFPH FDNGNGLQPQ  360
SSCLENKKEG AFFNNQCSAS SSSRTAAQLD NNQSTFPVRL DTEASGSMEA GPRTDLNENP  420
AQFPLDGGDQ HTGFHPKENG SREIFLSPLL NHGGVASTIK HENGLESDFS ANTEKSSTAC  480
HPFSSLPEKN SEPIIYPSRK IADAIAAAEA RKRRKKLTKL KNLHGRQCRM QC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	9e-53	bZIP family protein