PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr3g0450741

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 319aa MW: 36459.5 Da PI: 9.3139

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr3g0450741	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.9	9.6e-20	79	140	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r++R+++t+eql+ Leel+ ++p+ae++++ +++l +++ ++V++WFqN+Ra+e++ RcHm_v2.0_Chr3g0450741 79 RSSRWNPTPEQLRFLEELYGHgLKTPTAEKIRQVTARLrhfgKIEGKNVFYWFQNHRARERQ 140 689**************988************************************97 PP
2	Wus_type_Homeobox	107.3	9.4e-35	79	142	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely +Gl+tP++e+i+++ta+L+++Gkie+kNVfyWFQN++aRerqk+ RcHm_v2.0_Chr3g0450741 79 RSSRWNPTPEQLRFLEELYGHGLKTPTAEKIRQVTARLRHFGKIEGKNVFYWFQNHRARERQKR 142 589***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MNNSRDIHQD DHYSIKAANV HEPAAEVAFT PKLSGTSNMT QSHVLSFNHH HHQVVGVTSS 60 DQGRSASVGQ QPPSAASQRS SRWNPTPEQL RFLEELYGHG LKTPTAEKIR QVTARLRHFG 120 KIEGKNVFYW FQNHRARERQ KRRRELMSVP QYHSKEQQLW SNKESAGAAG LRRSSTLEIE 180 RQNKWTLSNC RVLVDQELSP GLRKRMSMVT GNYSGQLEEQ SYSATLTSEA QRTNSSATLI 240 YPKLFDYHHP HYDYDYGMVL SAPNIYKGAE SRLETQTLEL FPLESGNVKG VNDTKSPMIR 300 TTNTDSNEDF IADQYFQFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	1e-22	WOX family protein