PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RcHm_v2.0_Chr2g0147401 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 146aa MW: 16239.7 Da PI: 6.1085 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.6 | 1.7e-11 | 62 | 120 | 38 | 96 |
EEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 38 ledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 + + g+sWe+++ ++k+ + + ++ Wk F ++n+Lk+gD +vF++++ s+++lv++v RcHm_v2.0_Chr2g0147401 62 VLTFAGKSWEMTCDGSNKKHKGLDKESWKAFIDDNNLKAGDGCVFEVMECSSTKLVLRV 120 56678********7766666678889********************8744555555443 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 146 aa Download sequence |
MAESAQSSSD TTIQLHGEEF WPLSGKPYFD IILAKTHVKP YYKLGIPAKL HPILPSCSFP 60 TVLTFAGKSW EMTCDGSNKK HKGLDKESWK AFIDDNNLKA GDGCVFEVME CSSTKLVLRV 120 QILRGDIPAE LLEKEKGDEA EKPIIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G33280.1 | 5e-09 | B3 family protein |