PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RcHm_v2.0_Chr1g0361571 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 75aa MW: 8686.91 Da PI: 5.9664 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.3 | 3.3e-11 | 8 | 57 | 1 | 51 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51 +ppG+rFhPtde l+++ L+ k + k+ e ++i+ ++++k+eP++Lp + RcHm_v2.0_Chr1g0361571 8 VPPGYRFHPTDERLLSD-LEDKNQCKDSENPTTIPVIEMCKHEPHELPDRR 57 69*************76.999999999888889**************9432 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 75 aa Download sequence |
MSCGDFIVPP GYRFHPTDER LLSDLEDKNQ CKDSENPTTI PVIEMCKHEP HELPDRRERG 60 GVKILHHQCQ VCIFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15170.1 | 9e-09 | NAC family protein |