PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr1g0324491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 143aa MW: 16350.5 Da PI: 10.4057 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 39.7 | 8.3e-13 | 30 | 91 | 2 | 57 |
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++ el+++ r p+ae+++++ +l +++ + V++WF N+ a+e++ RcHm_v2.0_Chr1g0324491 30 STRWTPTTYQIRIPTELYYNkgVRSPTAEQIQRICLQLkrygKIEGKYVFYWFRNHMAQERQ 91 58************999997689***********************************9996 PP | |||||||
2 | Wus_type_Homeobox | 89.7 | 2.9e-29 | 29 | 93 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt+ Qi+i +ely+ +G+r+P++e+iqri +L++yGkie+k VfyWF N+ a erqk+ RcHm_v2.0_Chr1g0324491 29 SSTRWTPTTYQIRIPTELYYnKGVRSPTAEQIQRICLQLKRYGKIEGKYVFYWFRNHMAQERQKK 93 689***************8769*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MEPKTLQPTE DGGSNKVAGS SANMLYRRSS TRWTPTTYQI RIPTELYYNK GVRSPTAEQI 60 QRICLQLKRY GKIEGKYVFY WFRNHMAQER QKKRFTLDVH VPMQRSGLIG NGNGTNWKPE 120 DQYINFGSFA SASASSAGVI TFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 2e-30 | WOX family protein |