PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr0c31g0501281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 191aa MW: 21333.6 Da PI: 4.8785 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 45.8 | 1e-14 | 24 | 82 | 5 | 57 |
SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 5 ttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +++t+ ql++L+ l++ +yp+ e+++e+ +l ++++++V++WFqN +a+e++ RcHm_v2.0_Chr0c31g0501281 24 WAPTPPQLRILKGLYYDkgFKYPTPEQIQEICLHLkqygQIEDKNVFFWFQNLKARERQ 82 89*************96569*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 90.9 | 1.2e-29 | 22 | 83 | 4 | 64 |
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 + W+Ptp Q++iL+ ly+ +G + P+ e+iq+i +L++yG+iedkNVf+WFQN kaRerqk RcHm_v2.0_Chr0c31g0501281 22 NCWAPTPPQLRILKGLYYdKGFKYPTPEQIQEICLHLKQYGQIEDKNVFFWFQNLKARERQK 83 67**************9889*****************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MEQQTQQQIE DGGNNQAAGT NNCWAPTPPQ LRILKGLYYD KGFKYPTPEQ IQEICLHLKQ 60 YGQIEDKNVF FWFQNLKARE RQKLKEFRNV PVGGSLDLNF GSTGSTSNDR STDRSIDLNF 120 GSRVGYGADG SIMEQRGEYH QEIETLPLFP MHGEDILGNM KTTSEGGGGY GGGSHISLEL 180 SLNSYRDADM A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 5e-21 | WOX family protein |