PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 196aa MW: 21979.4 Da PI: 8.7477 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.4 | 0.00098 | 87 | 107 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk+F k +L H+++H XP_023929775.1 87 CIVCGKHFCKKKSLGGHMKRH 107 558*****************9 PP | |||||||
2 | zf-C2H2 | 15 | 7.4e-05 | 128 | 148 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk+F +k L H++ H XP_023929775.1 128 CVVCGKRFVSKKALGGHMKQH 148 99*****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MTQVLFRSNN LLLINKLSNV KEEVYGALDS FIAWDLEFPL ITVKKALKTL EDQREWKRII 60 QFYSSFILSM DNDGTVLSLS LPEIWECIVC GKHFCKKKSL GGHMKRHPER PWRGLYPPPT 120 GHHAPEACVV CGKRFVSKKA LGGHMKQHPE RSWRGLLPPT GEPAAASNGN TTASSVIDLN 180 QPAPLLIDLN QPAPEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56200.1 | 9e-11 | C2H2 family protein |