PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929596.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 240aa    MW: 26475.5 Da    PI: 10.7823
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.86.3e-18143176134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_023929596.1 143 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 176
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MKKEESFINK DSSHQQFQTS SPVSVLESSS SCSGEKNVPR SPETITPGRR GRARSKRPRP  60
ATFNPRLAMQ LISPTSSITE TPQPFLAPKV TSDSENFAES RLLIKIPKQA NAEHKKKKKI  120
KLSVPLGPVE ANQNPPSQSV RKCMHCEITK TPQWRAGPMG PKTLCNACGV RYKSGRLFPE  180
YRPAASPTFI PSLHSNSHKK VIEMRNKTGE KVVIAGKMPT MAASPELIPN ANSNLALEYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15660KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-45GATA family protein