PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929357.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 410aa MW: 46023 Da PI: 6.9973

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929357.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.3e-32	228	281	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_023929357.1 228 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 281 9****************************************************7 PP
2	Myb_DNA-binding	47	6.1e-15	229	280	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_023929357.1 229 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 280 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MSRKEIFEEP SLHQIPDLSL HISPPNSAPS SICTGTNDAD SSFDIWRKDE SLKSYSDGSI 60 RDTELSLSNP INDLEAESRW RRNFSSGSGE EIQARHIINH GISLLDVPDG VKAIKGVPVY 120 NNNNNNNNNY SFPFSTLDHF KEMDPKFCFN QMAYLSSSSS PSFRPCGIGG FEPMSRYNGI 180 TMETLRPQQI QYLQQQHQYG VGASDFSNGF MRSRFMSKLP SKRNMRAPRM RWTSSLHARF 240 VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKNTDKAAA SSDGSGDEDN 300 FLNTTPAPHQ NENCLLNQRR ASNAALEHEI GYPSNLWSNP SSGGEWVQAS SRNMDRLRLE 360 TLPFQQRSGN QFEGNDDCAQ SKNSKGSSLN PKNPSLEFTL GRPDWPSKEL

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MSRKEIFEEP SLHQIPDLSL HISPPNSAPS SICTGTNDAD SSFDIWRKDE SLKSYSDGSI  60
RDTELSLSNP INDLEAESRW RRNFSSGSGE EIQARHIINH GISLLDVPDG VKAIKGVPVY  120
NNNNNNNNNY SFPFSTLDHF KEMDPKFCFN QMAYLSSSSS PSFRPCGIGG FEPMSRYNGI  180
TMETLRPQQI QYLQQQHQYG VGASDFSNGF MRSRFMSKLP SKRNMRAPRM RWTSSLHARF  240
VHAVELLGGH ERATPKSVLE LMDVKDLTLA HVKSHLQMYR TVKNTDKAAA SSDGSGDEDN  300
FLNTTPAPHQ NENCLLNQRR ASNAALEHEI GYPSNLWSNP SSGGEWVQAS SRNMDRLRLE  360
TLPFQQRSGN QFEGNDDCAQ SKNSKGSSLN PKNPSLEFTL GRPDWPSKEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	4e-60	G2-like family protein