PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023929344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 266aa MW: 30413.6 Da PI: 4.4126 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 67 | 120 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++++eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_023929344.1 67 KKRRLSPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 120 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 134.8 | 3e-43 | 66 | 157 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrls eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l ++ ++L ke+e+L++e+ XP_023929344.1 66 EKKRRLSPEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDDLKSSYDSLYSNYDTLVKEHEKLKSEVV 157 69**************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MMESGRLFFD PSGCRGSNML FLGNGDNVFR GGRAIMSMEE SSKRRSFFSS PDELFDEEYY 60 DEQLPEKKRR LSPEQVHLLE KSFETENKLE PERKTQLAKK LGLQPRQVAV WFQNRRARWK 120 TKQLERDYDD LKSSYDSLYS NYDTLVKEHE KLKSEVVSLN EKLQAKGVAG ADISAQKAEP 180 LPGDITNVSA LQFSVKVEDR LSCGSAVVDE DGPQILDTGD SYFPSDNYPA EDDGSDDGHS 240 YFCNVFVAAE PQHQEDEEPL EWLEWP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 123 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 4e-74 | HD-ZIP family protein |