PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929202.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 290aa    MW: 32420.6 Da    PI: 8.2243
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.8e-17215249135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  XP_023929202.1 215 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 249
                     *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MDFCRNVAVS GEYQQEQVLS PPCSKLGDLS TSLDDLFSAQ NTEVDVSLEW LSVFVEDCLS  60
STGNCLPTPT DVPTTHTNTN TSSKSSKPHQ KLQQNPTSLQ NFVVPGKARS KRKRATTPKT  120
IKPSSIWSHH PNPQHQSLIN MASSDPPLLQ QAYWLADSEL ILPKKEKSNI LIRHGEQEET  180
RKEEAEEEEE KGMMDKDRLG TLEGSNEQHQ MPRRCTHCLA QRTPQWRAGP LGPKTLCNAC  240
GVRYKSGRLL PEYRPAKSPT FVSYLHSNSH KKVMEMRMAL PSSIPSASGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.17e-36GATA family protein