PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023928494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 236aa MW: 26801.6 Da PI: 8.7719 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.2 | 1.7e-31 | 9 | 57 | 1 | 49 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gkly+y XP_023928494.1 9 KRIENKINRQVTFSKRRNGLLKKAHELSVLCDAEVALIIFSSRGKLYDY 57 79**********************************************9 PP | |||||||
2 | K-box | 85.5 | 1.1e-28 | 81 | 162 | 10 | 91 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 e++++s +qe+a Lk+++++Lq +qRhllGedL++Ls+keLq+Le+qLe +l+ R++K+++++e++eel+kk + ++e + XP_023928494.1 81 IERETQSFYQEYAMLKAKYDSLQITQRHLLGEDLGPLSVKELQSLEKQLEGALQLARQRKTQIMIEEMEELRKKLQLNEEGH 162 56789*********************************************************************99887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAHELSVLCD AEVALIIFSS RGKLYDYGNV 60 GITKTLERYQ QSCFTPQDNS IERETQSFYQ EYAMLKAKYD SLQITQRHLL GEDLGPLSVK 120 ELQSLEKQLE GALQLARQRK TQIMIEEMEE LRKKLQLNEE GHTLKAIQTI WGSTSAAGNT 180 NFAFHPSPLS PMECQTEPVL QIGFTHYAQE GSSGPKNMSN EGNFIPGWGL ATPFKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 2e-91 | MIKC_MADS family protein |