PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023926847.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 241aa MW: 26789.8 Da PI: 7.5004 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 90 | 141 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr+++ +g ++AeIrdp++ng r++lg++ +e+Aa a+++a+ k++g XP_023926847.1 90 PHYRGVRRRP-WGTYAAEIRDPKKNG--SRVWLGTYKKPEDAALAYDRAAFKMRG 141 68********.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDSDLAVLES IRQYLLGESE TFDQVEVCLG DIFTSETTNY WGSSPLKAED NNVNFGWVPS 60 NEVVDDPVKA KPRETNNKEA VAVAREAHAP HYRGVRRRPW GTYAAEIRDP KKNGSRVWLG 120 TYKKPEDAAL AYDRAAFKMR GCKAKLNFPH LIGSNMAEPP VRVTNKRRSP EPSSPSDNGL 180 AKSKRSRSRS GSVVQAESSN GSSSAIEEVS SEAFGSFSID TWYSSVNESF TMWPLDYTKL 240 L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 189 | KRSRSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 6e-46 | ERF family protein |