PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023926839.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23511.4 Da PI: 10.2685 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.3 | 5.3e-20 | 48 | 99 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+++AeI dp++ng +r++lg++ t+e+Aa a+++a+ k++g XP_023926839.1 48 PRFRGVRRRP-WGKYAAEISDPKKNG--ARVWLGTYETPEDAALAYDKAAFKMRG 99 689*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MHINVIVKVR TDDSRATHIT RGGLKLNRPR ESSKEVVVVV VARGTQEPRF RGVRRRPWGK 60 YAAEISDPKK NGARVWLGTY ETPEDAALAY DKAAFKMRGS KAKLNFPHLI GSTQVVEPVG 120 VTHKRRLPEP SSPSSDDGGS KNKRSRISSS STSSVGQAEF SNGSSSSSPT LEEGLSDQAI 180 DITWQSLVNE PITWWRSLDY LCYDIPASSF SHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-42 | ERF family protein |