PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023926743.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

SBP

Protein Properties

Length: 469aa MW: 52437.5 Da PI: 8.4825

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023926743.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.3	4e-42	179	256	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v gle+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+ XP_023926743.1 179 RCQVEGCNLDLSSAKDYHRKHRVCESHSKSPKVIVGGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQP 256 6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEWNEKSPSQ WEWENLFMFN AKATENSKLQ EIEWGMQGDQ GINSGSFYSS AGGEGSDGSG 60 PELRHASPSK SSKSASINSS SMGESKPSKL TFEAFGGFPN DLSNKKELAK VEPKRISRTL 120 EPSSGCSEPL LSLKLGKQMY FEDACVGSNT ETSTFTMIPM PSVTTAKKCK TSFQSTTPRC 180 QVEGCNLDLS SAKDYHRKHR VCESHSKSPK VIVGGLERRF CQQCSRFHGL SEFDEKKRSC 240 RRRLSDHNAR RRKPQPEAVR LNPARLPSSL YDGKQQMSLV FNKGPLAYSR SAGFTWEDIC 300 SSKINQTKEY PLKPAKARDS DIQLHLPSNE MPRSINTLCH DSSRLLPSKG TVAEALNPGL 360 GESMMSTDLD ASQDFRRALS LLSTNSWESQ ESKPARHPHS NHTSQSNMPQ PLMHAMTQGL 420 PHTSSEHWRT EQQSTESQVH ILSSPNNGSS HFQEFQLFKE PYEFGFYSN

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEWNEKSPSQ WEWENLFMFN AKATENSKLQ EIEWGMQGDQ GINSGSFYSS AGGEGSDGSG  60
PELRHASPSK SSKSASINSS SMGESKPSKL TFEAFGGFPN DLSNKKELAK VEPKRISRTL  120
EPSSGCSEPL LSLKLGKQMY FEDACVGSNT ETSTFTMIPM PSVTTAKKCK TSFQSTTPRC  180
QVEGCNLDLS SAKDYHRKHR VCESHSKSPK VIVGGLERRF CQQCSRFHGL SEFDEKKRSC  240
RRRLSDHNAR RRKPQPEAVR LNPARLPSSL YDGKQQMSLV FNKGPLAYSR SAGFTWEDIC  300
SSKINQTKEY PLKPAKARDS DIQLHLPSNE MPRSINTLCH DSSRLLPSKG TVAEALNPGL  360
GESMMSTDLD ASQDFRRALS LLSTNSWESQ ESKPARHPHS NHTSQSNMPQ PLMHAMTQGL  420
PHTSSEHWRT EQQSTESQVH ILSSPNNGSS HFQEFQLFKE PYEFGFYSN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	236	253	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-69	SBP family protein