PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924794.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 290aa    MW: 31398.4 Da    PI: 7.5082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-19144194255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrdp +ng  +r++lg+f tae+Aa a+++a+ +++g
  XP_023924794.1 144 HFRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEDAALAYDRAAYRMRG 194
                     79*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MYGQSSTEAD LALLESIRRH LLGETEVGSS GNGPIFGRSS SFGSLYPCLT ENWGELPLKE  60
DDSEDMVLYG VLRDAVNVGW VPFPSLAPVP AESFNFGSQV IKTEPDMFVS VKSEPEILPE  120
TKVVPAVAPP HKAEPAVVPS KGKHFRGVRQ RPWGKFAAEI RDPAKNGARV WLGTFETAED  180
AALAYDRAAY RMRGSRALLN FPLRVNSGEP DPVRVTSKRS SPEPTSSISS VDSVSPKRRR  240
KADFTAAQKV DQAQAQAQAG LRMGSGVESL QVAQQVAPCT RGEQVLVSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-71ERF family protein