PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023924244.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 277aa    MW: 30424.5 Da    PI: 8.1288
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023924244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.00022104126123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023924244.1 104 FSCNYCQRKFYSSQALGGHQNAH 126
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDLPSPSETE TSNIFSVSES TPTCLKQKPS LESPKDQQED HQKNQHADSN PDLVLDLSLS  60
SKDSHKGSNP ELNLIDSFDA NSSDSPPPPS PPPPQGNETE PRVFSCNYCQ RKFYSSQALG  120
GHQNAHKRER TLAKRGQKIT SLSSTAFGNR YPSSMASLPL HGSFNINRSL GIRVHSRIHK  180
PSYHYQQPIS TIGSTSSSYL YGQNGWSRQP IDQQPAIGRI VQDNFHAGSA TNGVGIARFD  240
SVQGGLWWDS SSTSVAAHLN LKTKQDELQK LDLSLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.17e-45C2H2 family protein