PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923677.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | SBP | ||||||||
Protein Properties | Length: 341aa MW: 37977.4 Da PI: 8.851 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 131.6 | 2.7e-41 | 192 | 269 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adl++ak+yhrrhkvCe+hska++vl++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+ XP_023923677.1 192 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVLAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ 269 6**************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MLDYEWSNPS TMMLTGEEET GPDSDHTRQI FDHYTQQQQH HHQQQPFHDH TGFNPHHHHH 60 QTSATSAFSH AQAHFNPHQT QTQTHTLTQF HSLYDPRAYS SASAASYHQQ APQLLSLDPL 120 PGAAVGSGGS AGYLVVPKSE DASTRPPVDF VSRIGLNLGG RTYFSSAEDE FVNRLYRRAR 180 PANEPGSGNS PRCQAEGCNA DLTHAKHYHR RHKVCEFHSK ASTVLAAGLT QRFCQQCSRF 240 HLLSEFDNGK RSCRKRLADH NRRRRKTQQP NQENQKSLSD NARNSTTSNL TRSPPDSGAP 300 SSSSVTVAVS PPRMSLDCFR QRPYQATASS ASSSSLFFSS G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02065.1 | 3e-72 | SBP family protein |