PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923672.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 341aa    MW: 37977.4 Da    PI: 8.851
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.62.7e-41192269178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cq+egC+adl++ak+yhrrhkvCe+hska++vl++gl+qrfCqqCsrfh lsefD++krsCr+rLa+hn+rrrk+q+
  XP_023923672.1 192 RCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVLAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQ 269
                     6**************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MLDYEWSNPS TMMLTGEEET GPDSDHTRQI FDHYTQQQQH HHQQQPFHDH TGFNPHHHHH  60
QTSATSAFSH AQAHFNPHQT QTQTHTLTQF HSLYDPRAYS SASAASYHQQ APQLLSLDPL  120
PGAAVGSGGS AGYLVVPKSE DASTRPPVDF VSRIGLNLGG RTYFSSAEDE FVNRLYRRAR  180
PANEPGSGNS PRCQAEGCNA DLTHAKHYHR RHKVCEFHSK ASTVLAAGLT QRFCQQCSRF  240
HLLSEFDNGK RSCRKRLADH NRRRRKTQQP NQENQKSLSD NARNSTTSNL TRSPPDSGAP  300
SSSSVTVAVS PPRMSLDCFR QRPYQATASS ASSSSLFFSS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G02065.13e-72SBP family protein