PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923549.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 384aa MW: 43594.5 Da PI: 4.7114 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.6 | 1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT eEde+l+++++ G g+W++ ++ g+ R++k+c++rw +yl XP_023923549.1 14 KGRWTSEEDEILIKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eEde +++++ +G++ W++Ia++++ gRt++++k++w+++l XP_023923549.1 67 RGNISREEDETIIKLHSSMGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 78899*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence |
MGRAPCCDKV GLKKGRWTSE EDEILIKYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRSDLKRGNI SREEDETIIK LHSSMGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIHSFR 120 RSSSETLPMV MDSSKADILP KRKGGRTSRW AMKKNKTYYI QKDVPKIKPK DSPLTPNIEE 180 VLLLPTPDLE QETFSSTTIN DRMVLDPKVN DNERESLALR SDEAWKCENQ RLYASGEKKT 240 ETLVPYDHDQ EGIDGGVFND IVDNDLLDPD GVLALTEGRG GYDIIDFNDG NDSGFMCADK 300 MLATHEDLQE SGQFSSNGDN GEWYSCSSIT SGFDDGVERG NEIWDEKEKM LSSLWESDNW 360 EGDSYNLSEI DSDTHDAMVA WLLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 7e-76 | MYB family protein |