PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923473.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 521aa    MW: 58612.8 Da    PI: 8.8473
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923473.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3598.7e-19152241198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k l++s+v +  ++ lp kf+++h  +  +++ +tlede g+++ +k+i  k++    l++GW++F  a++L egD++vF+l++ ++f  +v 
  XP_023923473.1 152 FVKSLVRSHVASCFWMGLPGKFCKAHLPD--KDTAITLEDEGGKQYVLKYIAYKTG----LSAGWRQFSAAHNLIEGDVLVFQLVEPTKF--KVY 238
                     89************************534..5668***************666665....9**********************9876666..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023923473.1 239 IIR 241
                     887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MDRKVKREME ERGEEAAEEK EKQGPETTSC AAEEADDITL AQLSLSKISK LKPKHKPKPK  60
PMPLPKSNLN PDSNSIVPIS SSSPKPIEKK SKNKKENAVS KINNSDVLSV NQVEMTARIC  120
KHAFDGRGGA LSSALIRGEE VQSNLQHEYP SFVKSLVRSH VASCFWMGLP GKFCKAHLPD  180
KDTAITLEDE GGKQYVLKYI AYKTGLSAGW RQFSAAHNLI EGDVLVFQLV EPTKFKVYII  240
RPNDFTEVDG ALGLLNLDAQ TKQNVADKDN VEMGTIASSN TVKKRPTILP NYVVKRKKKR  300
SGLQRSIPYL RQLAEQSEND SEEVGSEVLE GSKLSEPPVQ FKDIKSFVRF HILVDGMPID  360
SELSEDIRRK YFKLCHSQNA FLHDSLVKGI NYNLIVGIIL ETVNIADAIK ASKLTTTREE  420
FSSWDQTLKA FEQLGMNVRF LRSRLRRIIS LAYESESAKS TRTYLEARNE QSRTEDEIRN  480
IEGKLAELKE ACDGFGAYIE SLKSKSVLYE HKFQQEVTAP W
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1283300KKRPTILPNYVVKRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-37B3 family protein