PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923472.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 523aa    MW: 58786.9 Da    PI: 8.8473
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.98.7e-19154243198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k l++s+v +  ++ lp kf+++h  +  +++ +tlede g+++ +k+i  k++    l++GW++F  a++L egD++vF+l++ ++f  +v 
  XP_023923472.1 154 FVKSLVRSHVASCFWMGLPGKFCKAHLPD--KDTAITLEDEGGKQYVLKYIAYKTG----LSAGWRQFSAAHNLIEGDVLVFQLVEPTKF--KVY 240
                     89************************534..5668***************666665....9**********************9876666..888 PP

                     EE- CS
              B3  96 vfr 98 
                     ++r
  XP_023923472.1 241 IIR 243
                     887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MDRKVKREME ERGEEAAEEK EKQGPETTSC AAEEADDITL AQLSLSKISK LKPKHKPKPK  60
PMPLPKSNLN PDSNSIVPIS SSSPKPIEKK SKNKKENAVS KINNSDVLSV NQVEMTASSR  120
ICKHAFDGRG GALSSALIRG EEVQSNLQHE YPSFVKSLVR SHVASCFWMG LPGKFCKAHL  180
PDKDTAITLE DEGGKQYVLK YIAYKTGLSA GWRQFSAAHN LIEGDVLVFQ LVEPTKFKVY  240
IIRPNDFTEV DGALGLLNLD AQTKQNVADK DNVEMGTIAS SNTVKKRPTI LPNYVVKRKK  300
KRSGLQRSIP YLRQLAEQSE NDSEEVGSEV LEGSKLSEPP VQFKDIKSFV RFHILVDGMP  360
IDSELSEDIR RKYFKLCHSQ NAFLHDSLVK GINYNLIVGI ILETVNIADA IKASKLTTTR  420
EEFSSWDQTL KAFEQLGMNV RFLRSRLRRI ISLAYESESA KSTRTYLEAR NEQSRTEDEI  480
RNIEGKLAEL KEACDGFGAY IESLKSKSVL YEHKFQQEVT APW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1285302KKRPTILPNYVVKRKKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-37B3 family protein