PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023923452.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 206aa    MW: 23688.2 Da    PI: 5.2138
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023923452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.2e-2084133255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W++eIrdp+e   +kr +lg+f taeeAa+a+++a+ +++g
  XP_023923452.1  84 RYRGVRQRP-WGKWASEIRDPRE---SKRKWLGTFLTAEEAARAYDKAAIEFRG 133
                     8********.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MNGSNASKIY RWCPWRARIT EEQEQDILVS ALKHVVSDGI QGLTPQHHQL LQQQPVPPDA  60
ATSSLPSTSK RSSKKKMKNY NEKRYRGVRQ RPWGKWASEI RDPRESKRKW LGTFLTAEEA  120
ARAYDKAAIE FRGPRAKLNF PMSDYVGKQS EVEQDQHEEN PNVNAETMIE SETQTVEVVE  180
SSDEDSELSD WLTSEELDQL LKDLND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-20ERF family protein