PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023923446.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 23388.1 Da PI: 6.3701 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 64.2 | 2.7e-20 | 90 | 140 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr ++ +g+W++eIrdp++ +kr +lg+f taeeAa+a+++a+ ++g XP_023923446.1 90 KKYRGVRLRP-WGKWASEIRDPRK---SKRKWLGTFPTAEEAARAYDKAAIDFRG 140 59********.**********943...5**********************99887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MDGFYASSID MWCPWRTRIT EEQEHDIMVS VLKQVITGGI QGLTPQHFQL LQQKPVQPPR 60 AATSSLPSTS GASTTTKRSS KKKNNDNNEK KYRGVRLRPW GKWASEIRDP RKSKRKWLGT 120 FPTAEEAARA YDKAAIDFRG PRAKLNFPLS DYVVEDQLHE QVHNHEANPN VNAETQILEV 180 PESSDEEGEL WDSLTSEELE QLLKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34410.1 | 5e-21 | ERF family protein |