PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023923081.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 215aa MW: 23921.2 Da PI: 5.204 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.2e-17 | 36 | 86 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GVr +k++ +Wv+e+r+p +k+ r++lg+f tae+Aa+a + a+ +l+g XP_023923081.1 36 SVYRGVR-RKNSRKWVCEVREP---NKKSRIWLGTFPTAEMAARANDVAAIALRG 86 78****9.6779******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MDNACMVNLS DEEVMLASKN PKKRDGRKKF KETRHSVYRG VRRKNSRKWV CEVREPNKKS 60 RIWLGTFPTA EMAARANDVA AIALRGRYAC LNFADSVWRL PVPASAAAKD IQRAALEAAE 120 AFRPAQLDGV SGDDLTRKLE NAAAEVTVAE TAVTVVAEAE IEPENVFFMD EEAVFNLPGL 180 LRNMAEGMLL PSPPHWYGGD DMETDSEVSL WSYSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 3e-68 | ERF family protein |