PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023922404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 260aa MW: 28595.2 Da PI: 8.4047 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.6 | 4.3e-20 | 145 | 195 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ taeeAa a+++a+ +++g XP_023922404.1 145 HYRGVRRRP-WGKYAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAYRMRG 195 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MNFPTLGEFS FPQLCHRSSA SVGLFPYLTE QWGDLPFKVD DSEDMIVYNS LHDAVSFGWS 60 PLDLTAATTT ATAAATSIKA EPRDIFQQLA PGAAEPFRLA PQSAAQNNSY ESTFLALKSE 120 IEFSNTIASK KTENKVSATI TKERHYRGVR RRPWGKYAAE IRDPAKNGAR VWLGTYETAE 180 EAALAYDRAA YRMRGSKALL NFPHRIGSGE PEPVRITAKR REPEPGLENG GSAKRGKVAK 240 EIEAVFQLGS LPVAEQLLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 4e-43 | ERF family protein |