PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023922057.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family FAR1
Protein Properties Length: 252aa    MW: 28839.2 Da    PI: 6.5204
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023922057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.41.2e-2888175291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  XP_023922057.1  88 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 175
                     ******************************************9988..9**************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEFSVDGNLN GEVDGNSAEL EDHRVNDENE TGGSSVEGAF QQDQDDKMNQ DFSGMDIVPN  60
AIPSVSMIPS DEPYVGQEFE SEASAHAFYN AYATRVGFII RVSKLSRSRR DGSAIGRALV  120
CNKEGYRMPD KREKIVRQRA ETRVGCRAMI LVRKVSSGKW VVTKFVKEHT HPLTPGKGRR  180
DCIYDQYPNE HDKIRELSQQ LAIEKKRAAT YKRHLEMIFE HIDEHNESLS KKIQYIVDNV  240
KEMETKEQQN QR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-115FAR1 family protein