PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023921492.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 220aa    MW: 24182.3 Da    PI: 5.9987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023921492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182777155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  XP_023921492.1 27 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 77
                    59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MVKTELNKIL HLDTSKPMPS TSASKKKKYK GVRMRSWGSW VSEIRAPNQK TRIWLGSYST  60
PEAAARAYDA ALLCLKGSSA NLNFPITTTS SHHIPHCDTI MSPKSIQRVA AAAANSTLID  120
TTTTSTTPQS PPTLSSSSTV SSPSMSSSPC DQLDDDVSHS LMPSYEVNYE PMAMMESWYN  180
FDSLQSPKFI DQMLNGALFD PPAVVDDLYE ESDIPLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-38ERF family protein