PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920572.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 323aa    MW: 36559.7 Da    PI: 4.8158
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.7e-19103153155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr ++ +grW+AeIrdp     +   r++lg+++taeeAa  +++a+ +++g
  XP_023920572.1 103 KKFRGVRLRP-WGRWAAEIRDP-----HrkVRIWLGTYDTAEEAALVYDKAAIRIKG 153
                     59********.**********6.....336***********************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MNDSVKYTEH RKVTNKVVKS LGTQFSVPNA EKPKIVRISV TDADATDSSG SEDEKEASIH  60
RHRVKRVVNE IRIEDFSHYV SSRAGQPQPQ PQPKTKQASS AVKKFRGVRL RPWGRWAAEI  120
RDPHRKVRIW LGTYDTAEEA ALVYDKAAIR IKGPDALTNF LKPPEQVVVS GDYDSGQESN  180
QIMSVSPVSS SSCCKAQQKP EIDVGNCGGT FYDCDNSGKD SQSHSVYSPT SVLRFQPVEL  240
GTEAESDWKP VTEEMDFRCF DDYYFDSQTL QPPPPPMFLE DDMMRVQETY IKEEDLCDIS  300
FDVLDADFGS CKWDVEDYFR DPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-45ERF family protein