PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023920072.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ZF-HD
Protein Properties Length: 287aa    MW: 31549.8 Da    PI: 8.6427
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023920072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.81.1e-3258113458
     ZF-HD_dimer   4 vrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                     v YkeClkNhAa++Gg a+DGCgEf+ps++++ +++++lkCaACgCHRnFHRr+++
  XP_023920072.1  58 VSYKECLKNHAATMGGLALDGCGEFLPSPNATpSDPTSLKCAACGCHRNFHRRDTD 113
                     79*****************************99********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MDFNPTSPTT PTPDTDAETP PQTQPFKSLS FTNGSLKRHH PLPLPPPTQP QQEPPMLVSY  60
KECLKNHAAT MGGLALDGCG EFLPSPNATP SDPTSLKCAA CGCHRNFHRR DTDTVPKVLN  120
FHHQLKLSSP SSSPSTSTSP VRSPPPVSHL PPSQYYYSSP SSLPQMLLSL SAAAEPSSEN  180
PLGKKRFRTK FTQEQKEKMF AFSKKLGWTM QKCNDDLVEE FCKEVGIDRK VLRVWMHNNK  240
STLRKKEMGL VDPHSTVSDG TAAFCCKKEI DYSVNLHVSA NGSAPSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-36ZF-HD family protein