PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023917505.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB
Protein Properties Length: 256aa    MW: 28311.6 Da    PI: 6.8938
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023917505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.61.2e-121761248
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     g W + Ed +l +av+q+G++ W ++a+++  +R + qc  rw+ +l
   XP_023917505.1 17 GTWLPAEDHRLSEAVAQYGSR-WVLVASKVE-TRNGDQCAKRWNEHL 61
                     78*******************.*********.************886 PP

2Myb_DNA-binding21.65e-0782117844
                      HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding   8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                      ++e+l+++v+q+G++ Wk Ia+ + + R +  +k+++
   XP_023917505.1  82 DEERLLNLVEQYGNN-WKPIASSFFESRAPLALKNKY 117
                      79***********99.*****9988888888888888 PP

Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MSSQQPHPQH QKPLNSGTWL PAEDHRLSEA VAQYGSRWVL VASKVETRNG DQCAKRWNEH  60
LNPELDRSPW TAEEASVPIS SDEERLLNLV EQYGNNWKPI ASSFFESRAP LALKNKYSLL  120
MRRLKRRGLD QQPLTQRPQQ DVAARHAARP RLSSSVTSPS IAGAVEQLNF YAGSGPVDLS  180
ANDTAGINTN LPTTSLVANN DYIGGVTAIN LGQEALPRTT TAMTIAPPSW DDQHLTWQHF  240
PFLGNGMEFG SVVSTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.12e-18MYB family protein