PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023917164.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 291aa MW: 33388.7 Da PI: 9.9964 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.1 | 2.5e-16 | 28 | 107 | 15 | 98 |
-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 15 rlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +l++p f+e + g++ ++s l + s ++W+v l + + ++++GW+ Fv++n L+ gDf++F++dg+s+f vk++ XP_023917164.1 28 QLRIPEAFVEYFdGEV-PNSSVLWGPSNSRKTWRVDL--KEVENNLFFQEGWSAFVQDNSLEMGDFLLFRYDGSSNF--SVKIYG 107 599******6665545.4553455555677*******..999999***************************99999..666654 PP | |||||||
2 | B3 | 44.7 | 2.4e-14 | 192 | 289 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+ + p +v++ + l +p +f++ +++k e+ +tl++ s + W+++l +y ++ g+ l++GW F+ n L +gD++vF+l+++ ++ + XP_023917164.1 192 FQVSMYPCYVNSDH-LNVPTSFFKIYMEKRER--NVTLRT-SDKLWTMRLvRYANSMGKvyGKLRQGWHAFAIGNALIVGDVCVFELIDKADGLF 282 67778888888888.********888877555..577666.88*******555777777444588***********************9988889 PP EEEEE-S CS B3 93 vvkvfrk 99 +v++f++ XP_023917164.1 283 KVSIFKS 289 9999986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 291 aa Download sequence |
MATKPLEPLK RVKKPSFCKV LIGDFPTQLR IPEAFVEYFD GEVPNSSVLW GPSNSRKTWR 60 VDLKEVENNL FFQEGWSAFV QDNSLEMGDF LLFRYDGSSN FSVKIYGRDC CEKGVAGASR 120 KSYTPVYGNG KEEKEKMRNY LKRKSKCMGS IRKERTVIEV IPRHLSCKLP KIQKGARAFE 180 AASKFISNYP SFQVSMYPCY VNSDHLNVPT SFFKIYMEKR ERNVTLRTSD KLWTMRLVRY 240 ANSMGKVYGK LRQGWHAFAI GNALIVGDVC VFELIDKADG LFKVSIFKSS C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66980.1 | 1e-19 | B3 family protein |