PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023917139.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 278aa MW: 31655.3 Da PI: 5.6425 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.6 | 1.6e-19 | 24 | 71 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd ll + ++++G g+W+++ar+ g++Rt+k+c++rw++yl XP_023917139.1 24 RGPWTAEEDTLLMNHITLHGEGRWNSVARCAGLKRTGKSCRLRWLNYL 71 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.6e-15 | 77 | 120 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T E++l+++++ q+G++ W++Ia++++ gRt++++k++w++ XP_023917139.1 77 RGNITLKEQLLILELHSQWGNR-WSKIAQYLP-GRTDNEIKNYWRT 120 78999*****************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MDFHVRACGS AKLVVGEEDM DIRRGPWTAE EDTLLMNHIT LHGEGRWNSV ARCAGLKRTG 60 KSCRLRWLNY LRPDVRRGNI TLKEQLLILE LHSQWGNRWS KIAQYLPGRT DNEIKNYWRT 120 RVQKQAKQLK CDVNSKQFRD AMRYVWIPRL MERIRATSES HLDQPTMEYS TTTDCGRVTL 180 DPSQVHASGS DPIDPYFVPA VSGTPSDSSE AQISDLTECY DFSGSNYPNE STNGSGFCPQ 240 GVDIQQAFEH GFGGGDTLDS LWNEENLSFL QQQLCDEI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 9e-89 | MYB family protein |