PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917137.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 364aa MW: 40832.9 Da PI: 5.4901

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917137.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.4e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl XP_023917137.1 14 RGLWTEEEDAKILAYVSKHGTGNWTAVPKKAGLKRCGKSCRLRWTNYL 61 788*******************************************97 PP
2	Myb_DNA-binding	44.4	3.9e-14	70	110	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +T++E+e +v++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_023917137.1 70 FTPQEEEMIVRLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 9****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MVRLPCCDRL NLKRGLWTEE EDAKILAYVS KHGTGNWTAV PKKAGLKRCG KSCRLRWTNY 60 LRPDLKHDGF TPQEEEMIVR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG GFRKPGTRVG PLNKDLKSGI MLKSEPYPAA PQGFQNFNSQ 180 LMTAKKEPIQ DTLFNNNHTD NYPSDLLAEL QSIKLVTEAS NCSNNETIPP PAFAEASLSS 240 SSVSYSPTCS TTAAQEKSSL DFSWHDFLLD DAFLPADPQE QETTAEYSSK EFASQKQKGI 300 LQIIDTDDEA AIRASNTKAR AIECAVISND FEASSSSDFA FVEAMLYQEY EMLLNFPNLE 360 PFYY

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MVRLPCCDRL NLKRGLWTEE EDAKILAYVS KHGTGNWTAV PKKAGLKRCG KSCRLRWTNY  60
LRPDLKHDGF TPQEEEMIVR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNIG GFRKPGTRVG PLNKDLKSGI MLKSEPYPAA PQGFQNFNSQ  180
LMTAKKEPIQ DTLFNNNHTD NYPSDLLAEL QSIKLVTEAS NCSNNETIPP PAFAEASLSS  240
SSVSYSPTCS TTAAQEKSSL DFSWHDFLLD DAFLPADPQE QETTAEYSSK EFASQKQKGI  300
LQIIDTDDEA AIRASNTKAR AIECAVISND FEASSSSDFA FVEAMLYQEY EMLLNFPNLE  360
PFYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	9e-76	MYB family protein