PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023917074.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

FAR1

Protein Properties

Length: 758aa MW: 86772.9 Da PI: 6.7947

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023917074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.7e-20	59	152	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a l++ k+ +w+vt +++ HnHel XP_023917074.1 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHRGGYPQLKPSEDGKMQRNRKSSRCGCQAYLRIVKRAdfdLPEWRVTGFSNIHNHELL 152 6*************9998874556679***************9***************99887665679***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 758 aa Download sequence
MSEGTSIVME SSENGTDLSQ DDIGTIEETP DNTILSRQTS VNLVPFIGQR FVSQEAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QLKPSEDGKM QRNRKSSRCG 120 CQAYLRIVKR ADFDLPEWRV TGFSNIHNHE LLKPQQVRLL PAYCTISPDD KSRICMFAKA 180 GMSVRQMLRL LELEKGVKLG CLPFTEIDVR NLLQSFRNVD RDSDAIDLIA MCKKLKDENP 240 NFKYDFKIDC HNRLEHIAWS YASSVQLYEA FGDAVVFDTT HRLDAYDMLL GIWLGVDNHG 300 MTCFFGCVLL QDENMHSFSW TLKTFLGFMK GKAPQTILTD HNMWLKDAIA IEMPETKHAF 360 CIWHIIAKFS DWFSILLGSH YDDWKDEFHR LYNMEFVEDF EGGWREMVNK YGFHANKHII 420 SLYALRSFWA LSFLRRYFFA GMMGTCQLES INAFIQRFMS AQSQLDHFVE QVADIVDFND 480 RVGAKQKMQR KLQKVSLKTG SPIESHAATL LTPYAFSKLQ EELVLAPQYA SLLVDEGCFQ 540 VRHHTQIDGG CNVIWIPCQE HISCSCHQFE FSGILCRHVL RVLSTNNCFH IPDRYLPTRW 600 RSVNSSCSNP FRTATTREHS ERIQLLESMA STLVTESIET EERLDVACEQ MAMVLSRIKD 660 LSRSTHCMNE IAYNCPSDSL ILPEVEDADG IVQSFTIGNP HDNITLGKLK ERRPREGIDT 720 IRKRRHCTGP CCGHFGHDGS ACSLMGDDDL HGDALGYL

Sequence ? help Back to Top

Protein Sequence Length: 758 aa Download sequence

MSEGTSIVME SSENGTDLSQ DDIGTIEETP DNTILSRQTS VNLVPFIGQR FVSQEAAYEF  60
YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHRGGYP QLKPSEDGKM QRNRKSSRCG  120
CQAYLRIVKR ADFDLPEWRV TGFSNIHNHE LLKPQQVRLL PAYCTISPDD KSRICMFAKA  180
GMSVRQMLRL LELEKGVKLG CLPFTEIDVR NLLQSFRNVD RDSDAIDLIA MCKKLKDENP  240
NFKYDFKIDC HNRLEHIAWS YASSVQLYEA FGDAVVFDTT HRLDAYDMLL GIWLGVDNHG  300
MTCFFGCVLL QDENMHSFSW TLKTFLGFMK GKAPQTILTD HNMWLKDAIA IEMPETKHAF  360
CIWHIIAKFS DWFSILLGSH YDDWKDEFHR LYNMEFVEDF EGGWREMVNK YGFHANKHII  420
SLYALRSFWA LSFLRRYFFA GMMGTCQLES INAFIQRFMS AQSQLDHFVE QVADIVDFND  480
RVGAKQKMQR KLQKVSLKTG SPIESHAATL LTPYAFSKLQ EELVLAPQYA SLLVDEGCFQ  540
VRHHTQIDGG CNVIWIPCQE HISCSCHQFE FSGILCRHVL RVLSTNNCFH IPDRYLPTRW  600
RSVNSSCSNP FRTATTREHS ERIQLLESMA STLVTESIET EERLDVACEQ MAMVLSRIKD  660
LSRSTHCMNE IAYNCPSDSL ILPEVEDADG IVQSFTIGNP HDNITLGKLK ERRPREGIDT  720
IRKRRHCTGP CCGHFGHDGS ACSLMGDDDL HGDALGYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein