PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023917000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 226aa MW: 25153.1 Da PI: 5.1356 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.3 | 8.9e-19 | 48 | 98 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+++++g XP_023917000.1 48 TVYRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAALSIKG 98 57*****998.**********843...6***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MSMNELQQNS ETESTSNSNP SSPSSPQQQQ NPKKTKRNIH ERDSGKHTVY RGVRMRNWGK 60 WVSEIREPRK KSRIWLGTFP TPEMAARAHD VAALSIKGNS AILNFPELAD SLPRPASLAP 120 RDVQAAAAKA AQMSKFDSLA PSASLSTLVS AMDLSKESEE LSQIVELPSL GTSYESEQDF 180 SKEFVFVDSV DGWGMYSPPW FQTNMENFGA ETNMTLNSFE GLLWEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 4e-74 | ERF family protein |