PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916609.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

Protein Properties

Length: 826aa MW: 92748.4 Da PI: 6.2509

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60.3	3.2e-19	681	777	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpk+ e+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ +++ XP_023916609.1 681 QKVLKQSDVGNLGRIVLPKEA-ETHlpELEARDGISIAMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvKCG 771 79***************995.7888999999******7778*****777777777777.******************..566999 PP ..EEEE CS B3 91 elvvkv 96 +++++ XP_023916609.1 772 KYMIRG 777 888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 826 aa Download sequence
MGVEFYKGSK AYPDALCCIS LSSLSRFLNQ IQHNLSLLSI HRKPYPSLSL SKIYLRTSEP 60 KRVFKLQPFF CLIIFGYFRE MKTMEDLHAG LRNEANPISI VFDDGVEEEE ALDVDVDDRQ 120 IWLSDEQDHH ILADVHDASS MFYTDFPPLP DFPCMSSSSS SSCTPLPLKA MSSSSSASSS 180 TSSAASWAVL KSDAEEDVEK KNNHCHQQFQ GQHDQIVDDI APPQAELIST ASMEIPIPQQ 240 PLDNQGLEGV DCMDVMETFG YMDLLESNDF FDPSCIYQNE NNPLEDFCSQ EQMSQEQHAI 300 QEHDRLMMFQ SNHNNNNEEI QQEENQDPDD MASVFLDWLR TNKETVSAED LRSVKIKKST 360 IECAAKRLGG GKEAMKQLLK LVLEWVQTNH LQKRRFKDLT PTHFPNQYQD PFQNPNNSVT 420 PESNPNPNPC FTNQSTWIPA QPPYVPEPTA PPAAFPSIVG YMGTDPYTNG ASSNINVNNS 480 QVYTAPASAP PEYHMLDSSQ SWPSSQFTMS VSHYSTFPDN NSIHQPQQTF AGYGNQYPYH 540 QYFQGHSEST LVRLGSSATK EARKKRMARQ RRFLSHHRHH HNQHNQQNQC NQNTDLHASA 600 RLGNDNCTTA TAAQTNPANW VYWASAGGGG AASASLVMPA EAPPGHQADR TAMQVQNLQG 660 RVASDRRPGW KPEKNLRFLL QKVLKQSDVG NLGRIVLPKE AETHLPELEA RDGISIAMED 720 IGTSRVWNMR YRYWPNNKSR MYLLENTGDF VRANGLQEGD FIVIYSDVKC GKYMIRGVKV 780 RQAGPKSESK RAGKSQRNLH ATLTTPAGGV NNALSSPIAY PQKTVK

Sequence ? help Back to Top

Protein Sequence Length: 826 aa Download sequence

MGVEFYKGSK AYPDALCCIS LSSLSRFLNQ IQHNLSLLSI HRKPYPSLSL SKIYLRTSEP  60
KRVFKLQPFF CLIIFGYFRE MKTMEDLHAG LRNEANPISI VFDDGVEEEE ALDVDVDDRQ  120
IWLSDEQDHH ILADVHDASS MFYTDFPPLP DFPCMSSSSS SSCTPLPLKA MSSSSSASSS  180
TSSAASWAVL KSDAEEDVEK KNNHCHQQFQ GQHDQIVDDI APPQAELIST ASMEIPIPQQ  240
PLDNQGLEGV DCMDVMETFG YMDLLESNDF FDPSCIYQNE NNPLEDFCSQ EQMSQEQHAI  300
QEHDRLMMFQ SNHNNNNEEI QQEENQDPDD MASVFLDWLR TNKETVSAED LRSVKIKKST  360
IECAAKRLGG GKEAMKQLLK LVLEWVQTNH LQKRRFKDLT PTHFPNQYQD PFQNPNNSVT  420
PESNPNPNPC FTNQSTWIPA QPPYVPEPTA PPAAFPSIVG YMGTDPYTNG ASSNINVNNS  480
QVYTAPASAP PEYHMLDSSQ SWPSSQFTMS VSHYSTFPDN NSIHQPQQTF AGYGNQYPYH  540
QYFQGHSEST LVRLGSSATK EARKKRMARQ RRFLSHHRHH HNQHNQQNQC NQNTDLHASA  600
RLGNDNCTTA TAAQTNPANW VYWASAGGGG AASASLVMPA EAPPGHQADR TAMQVQNLQG  660
RVASDRRPGW KPEKNLRFLL QKVLKQSDVG NLGRIVLPKE AETHLPELEA RDGISIAMED  720
IGTSRVWNMR YRYWPNNKSR MYLLENTGDF VRANGLQEGD FIVIYSDVKC GKYMIRGVKV  780
RQAGPKSESK RAGKSQRNLH ATLTTPAGGV NNALSSPIAY PQKTVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-150	B3 family protein