PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023916606.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 829aa MW: 93100.8 Da PI: 6.3436 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 63 | 4.7e-20 | 681 | 780 | 2 | 96 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W++++++ ++ks++y+l+ ++ +Fv+angL+egDf+v++ ++ + XP_023916606.1 681 QKVLKQSDVGNLGRIVLPKKEAETHlpELEARDGISIAMEDiGTSRVWNMRYSHrywpNNKSRMYLLE-NTGDFVRANGLQEGDFIVIY--SDvK 772 79*************************999999********7778*******8778888888888887.********************..5669 PP EE..EEEE CS B3 89 efelvvkv 96 +++++++ XP_023916606.1 773 CGKYMIRG 780 99888765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 829 aa Download sequence |
MGVEFYKGSK AYPDALCCIS LSSLSRFLNQ IQHNLSLLSI HRKPYPSLSL SKIYLRTSEP 60 KRVFKLQPFF CLIIFGYFRE MKTMEDLHAG LRNEANPISI VFDDGVEEEE ALDVDVDDRQ 120 IWLSDEQDHH ILADVHDASS MFYTDFPPLP DFPCMSSSSS SSCTPLPLKA MSSSSSASSS 180 TSSAASWAVL KSDAEEDVEK KNNHCHQQFQ GQHDQIVDDI APPQAELIST ASMEIPIPQQ 240 PLDNQGLEGV DCMDVMETFG YMDLLESNDF FDPSCIYQNE NNPLEDFCSQ EQMSQEQHAI 300 QEHDRLMMFQ SNHNNNNEEI QQEENQDPDD MASVFLDWLR TNKETVSAED LRSVKIKKST 360 IECAAKRLGG GKEAMKQLLK LVLEWVQTNH LQKRRFKDLT PTHFPNQYQD PFQNPNNSVT 420 PESNPNPNPC FTNQSTWIPA QPPYVPEPTA PPAAFPSIVG YMGTDPYTNG ASSNINVNNS 480 QVYTAPASAP PEYHMLDSSQ SWPSSQFTMS VSHYSTFPDN NSIHQPQQTF AGYGNQYPYH 540 QYFQGHSEST LVRLGSSATK EARKKRMARQ RRFLSHHRHH HNQHNQQNQC NQNTDLHASA 600 RLGNDNCTTA TAAQTNPANW VYWASAGGGG AASASLVMPA EAPPGHQADR TAMQVQNLQG 660 RVASDRRPGW KPEKNLRFLL QKVLKQSDVG NLGRIVLPKK EAETHLPELE ARDGISIAME 720 DIGTSRVWNM RYSHRYWPNN KSRMYLLENT GDFVRANGLQ EGDFIVIYSD VKCGKYMIRG 780 VKVRQAGPKS ESKRAGKSQR NLHATLTTPA GGVNNALSSP IAYPQKTVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24650.1 | 1e-150 | B3 family protein |