PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023916600.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB

Protein Properties

Length: 262aa MW: 29543.3 Da PI: 5.2475

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023916600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l d+v+ +G + W+ +a++ g+ R++k+c++rw++yl XP_023916600.1 14 KGAWTAQEDKILTDYVAIHGERKWSNVAKKAGLQRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	49.5	1e-15	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++ E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_023916600.1 67 RGNISPAEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTI 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MGRLPCCSKE EMNKGAWTAQ EDKILTDYVA IHGERKWSNV AKKAGLQRCG KSCRLRWLNY 60 LRPDIKRGNI SPAEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT IMKKKLIDGK 120 QRRQKTTVPS DDEEITNSNT SVSNVVKTKE TTGSNALEEP FKDMCLVSDN VANESKSNDE 180 FKSIFSEDDY SPNFLSSFNY MDELLMADVS GSDFWKLCMS CDNVEGGCAN NGAINDLCPS 240 LDKPLPLFDD VSELMNHNDS LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	3e-60	MYB family protein