PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023916298.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 273aa    MW: 29738 Da    PI: 4.4987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023916298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1865115155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p  ng  k+ +lg+f ta +Aa a+++a+  ++g
  XP_023916298.1  65 CQYRGVRQRT-WGKWVAEIREP--NG-GKKLWLGTFETAIDAASAYDKAASTMYG 115
                     68*****999.**********9..33.5**********************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MVMDYPDQKK RKRKNSRDSV AKTLAKWKEK NTAQFVSCGA PKVQAKGSKK GCCVKGKGGP  60
ENSLCQYRGV RQRTWGKWVA EIREPNGGKK LWLGTFETAI DAASAYDKAA STMYGSSARL  120
NFPDITTHTS PMESVKDCCW TSSESVPYSM GSPVGSESTT AANPSEFCAD EDALYYPVTE  180
ADMPSLVGTE AEGESTGVSE FCADEGTLYY PVTEAKDEST NYFGDNGQEN LLDCSENENF  240
MYEIMALLND PVGNTDSVLG FGYDADQLGL GKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1914KKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.16e-28ERF family protein