PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915915.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 244aa MW: 28455.6 Da PI: 8.6062

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915915.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.5	8.6e-07	90	135	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er RR+r ++ + +L ++lP +K +K +i++ A I+ Lq XP_023915915.1 90 HMMNERMRRERQKQNYMTLHSMLPFG-----TKSDKNSIVQTAATKIQVLQ 135 789**********************6.....57777777777777777666 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MMDLFFPQEL QCDNDIIWYE AFEAVQPQVN QSAFVPYRDT PRNEFGAETS GNMKNCVNMK 60 KRMVEFLRRS WHPRNENEIQ EYEKERGFRH MMNERMRRER QKQNYMTLHS MLPFGTKSDK 120 NSIVQTAATK IQVLQKCREE LQRRNLEAEK NLAAVEGETV GGAKIKLKVA NPTSGVDSMV 180 EVLKCLKHLG LKTRTIRSNF TAQEFSAELE IESEIEAAKV EKAIQRALYE VERKLLRKFD 240 EGGI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	95	100	RMRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	5e-34	bHLH family protein