PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023915176.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 427aa MW: 46164.5 Da PI: 4.3216

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023915176.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	123.1	1.4e-38	141	236	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiW 96 lfqrlw++eDei lLqG++d+++++g+ ++d+ fy+++k++++++++k+qlveK+rrLKkK+++ v k+++gke+sf+++hdq +fe+s+kiW XP_023915176.1 141 LFQRLWTDEDEIELLQGFLDYTTSRGSTHHNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVVGKISTGKEFSFKSPHDQATFEISRKIW 235 79********************************************************************************************* PP DUF573 97 g 97 XP_023915176.1 236 S 236 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MASEENDTVF ADEDFDDDDD ELSEEEDEEE LDDDENDDVL PDPEDDDVIN SASPSTSSPT 60 VTVAVPSSSV SNAIVAVEPP ISTSAITTTV ITTSSAAAAA AAAAAATATT TPSPKRQRIT 120 IEPHVEEKKP QPIPIDDSRR LFQRLWTDED EIELLQGFLD YTTSRGSTHH NDTALFYDQI 180 KSKLQLDFNK NQLVEKLRRL KKKYRNVVGK ISTGKEFSFK SPHDQATFEI SRKIWSNSNI 240 NNNSNNRFAV VVDDSVFDDE DSKNPNLMEE NANYNNSGEK KANSSRKRSR SRVRSEEKAN 300 NGNENVVGSG GSGGSGGGGG GGGGVNLGGM IEETVKSCLS PLFKELLSNA MGSSGFGGRG 360 IGFGGMGMNA MAMNAMPLNF GGGESGGVVD EKWRKQQILE LEVYSKRLDL VQDQIRAALE 420 ELRSMGG

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MASEENDTVF ADEDFDDDDD ELSEEEDEEE LDDDENDDVL PDPEDDDVIN SASPSTSSPT  60
VTVAVPSSSV SNAIVAVEPP ISTSAITTTV ITTSSAAAAA AAAAAATATT TPSPKRQRIT  120
IEPHVEEKKP QPIPIDDSRR LFQRLWTDED EIELLQGFLD YTTSRGSTHH NDTALFYDQI  180
KSKLQLDFNK NQLVEKLRRL KKKYRNVVGK ISTGKEFSFK SPHDQATFEI SRKIWSNSNI  240
NNNSNNRFAV VVDDSVFDDE DSKNPNLMEE NANYNNSGEK KANSSRKRSR SRVRSEEKAN  300
NGNENVVGSG GSGGSGGGGG GGGGVNLGGM IEETVKSCLS PLFKELLSNA MGSSGFGGRG  360
IGFGGMGMNA MAMNAMPLNF GGGESGGVVD EKWRKQQILE LEVYSKRLDL VQDQIRAALE  420
ELRSMGG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	286	294	RKRSRSRVR
2	287	292	KRSRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	3e-53	GeBP family protein